I have a 98 eclipse 2.0 RS with a star stage 2 turbo kit 5speed. I've recently fixed the boost leaks and have changed the clutch for suspicion of it needing replacement. it had about 2months left of wear.

The car tends to spit the 3rd gear from engine torque. It will randomly holdon to the gears and not let me pull them out with the clutch in or the vehicle stopped. Its been siting for a week now and can not figure out why it would do this. Its like something in the tranny wont let go of a gear or let a gear in. Sometimes when i push the clutch in, it will let me shift but it will grind to the next gear. Its rather frustrating.

I've checked the clutch fluid and topped it off.
I checked the tranny fluid n it was full.
I checked the boot on the slave cylinder and it was dry.
I checked the linkage of the cables that go into the tranny and one of the cables was missing the boot.
I re-adjusted the intake pipe from the inter cooler because it seemed to be hitting the shifting lever closest to the motor.

Nothing seemed to have helped my issue...help please?