Try to get a local brake shop take a look or turn them and see if it goes away... problem with that is that the brake rotors will always warp again... I found this out the hard way... First set warped after 5K miles... Satan had them turned under warranty... Had to get a set of PowerStop Crossdrilled cause OEM warped again after another 5K... Finally got fed up and bought the AEM Big Brake setup with out the 4 Pot Calipers and have never had a problem. Car has 70K miles (AEM on for the last 40K) and have been turned once (yes, you can have them turned...) and I still love to "stop short"...

Don Wood
'99 Eclipse GS Sports Edition
Star Stage 2